blog/static/pages/Detect-people-with-a-RaspberryPi-a-thermal-camera-Platypush-and-a-pinch-of-machine-learning.md

[//]: # (title: Detect people with a RaspberryPi, a thermal camera, Platypush and Tensorflow)
[//]: # (description: Use cheap components and open-source software to build a robust presence detector.)
[//]: # (image: /img/people-detect-1.png)
[//]: # (published: 2019-09-27)

Triggering events based on the presence of people has been the dream of many geeks and DIY automation junkies for a
while. Having your house to turn the lights on or off when you enter or exit your living room is an interesting
application, for instance. Most of the solutions out there to solve these kinds of problems, even more high-end
solutions like the [Philips Hue sensors](https://www2.meethue.com/en-us/p/hue-motion-sensor/046677473389), detect
motion, not actual people presence — which means that the lights will switch off once you lay on your couch like a
sloth. The ability to turn off music and/or tv when you exit the room and head to your bedroom, without the hassle of
switching all the buttons off, is also an interesting corollary. Detecting the presence of people in your room while
you’re not at home is another interesting application.

Thermal cameras coupled with deep neural networks are a much more robust strategy to actually detect the presence of
people. Unlike motion sensors, they will detect the presence of people even when they aren’t moving. And unlike optical
cameras, they detect bodies by measuring the heat that they emit in the form of infrared radiation, and are therefore
much more robust — their sensitivity doesn’t depend on lighting conditions, on the position of the target, or the
colour. Before exploring the thermal camera solution, I tried for a while to build a model that instead relied on
optical images from a traditional webcam. The differences are staggering: I trained the optical model on more than ten
thousands 640x480 images taken all through a week in different lighting conditions, while I trained the thermal camera
model on a dataset of 900 24x32 images taken during a single day. Even with more complex network architectures, the
optical model wouldn’t score above a 91% accuracy in detecting the presence of people, while the thermal model would
achieve around 99% accuracy within a single training phase of a simpler neural network. Despite the high potential,
there’s not much out there in the market — there’s been some research work on the topic (if you google “people detection
thermal camera” you’ll mostly find research papers) and a few high-end and expensive products for professional
surveillance. In lack of ready-to-go solutions for my house, I decided to take on my duty and build my own solution —
making sure that it can easily be replicated by anyone.

## Prepare the hardware

For this example we'll use the following hardware:

- A RaspberryPi (cost: around $35). In theory any model should work, but it’s probably not a good idea to use a
  single-core RaspberryPi Zero for machine learning tasks — the task itself is not very expensive (we’ll only use the
  Raspberry for doing predictions on a trained model, not to train the model), but it may still suffer some latency on a
  Zero. Plus, it may be really painful to install some of the required libraries (like Tensorflow or OpenCV) on
  the `arm6` architecture used by the RaspberryPi Zero. Any better performing model (from RPi3 onwards) should
  definitely do the job.

- A thermal camera. For this project, I’ve used the
  [MLX90640](https://shop.pimoroni.com/products/mlx90640-thermal-camera-breakout) Pimoroni breakout camera (cost: $55),
  as it’s relatively cheap, easy to install, and it provides good results. This camera comes in standard (55°) and
  wide-angle (110°) versions. I’ve used the wide-angle model as the camera monitors a large living room, but take into
  account that both have the same resolution (32x24 pixels), so the wider angle comes with the cost of a lower spatial
  resolution. If you want to use a different thermal camera there’s not much you’ll need to change, as long as it comes
  with a software interface for RaspberryPi and
  it’s [compatible with Platypush](https://platypush.readthedocs.io/en/latest/platypush/plugins/camera.ir.mlx90640.html).

Setting up the MLX90640 on your RaspberryPi if you have a Breakout Garden it’s easy as a pie. Fit the Breakout Garden on
top of your RaspberryPi. Fit the camera breakout into an I2C slot. Boot the RaspberryPi. Done. Otherwise, you can also
connect the device directly to the [RaspberryPi I2C interface](https://radiostud.io/howto-i2c-communication-rpi/),
either using the right hardware PINs or the software emulation layer.

## Prepare the software

I tested my code on Raspbian, but with a few minor modifications it should be easily adaptable to any distribution
installed on the RaspberryPi.

The software support for the thermal camera requires a bit of work. The MLX90640 doesn’t come (yet) with a Python
ready-to-use interface, but a [C++ open-source driver is provided](https://github.com/pimoroni/mlx90640-library) -
and that's the driver that is wrapped by the Platypush integration. Instructions to install it:

```shell
# Install the dependencies
[sudo] apt-get install libi2c-dev

# Enable the I2C interface
echo dtparam=i2c_arm=on | sudo tee -a /boot/config.txt

# It's advised to configure the SPI bus baud rate to
# 400kHz to support the higher throughput of the sensor
echo dtparam=i2c1_baudrate=400000 | sudo tee -a /boot/config.txt

# A reboot is required here if you didn't have the
# options above enabled in your /boot/config.txt
[sudo] reboot

# Clone the driver's codebase
git clone https://github.com/pimoroni/mlx90640-library
cd mlx90640-library

# Compile the rawrgb example
make clean
make bcm2835
make I2C_MODE=LINUX examples/rawrgb
```

If it all went well you should see an executable named `rawrgb` under the `examples` directory. If you run it you should
see a bunch of binary data — that’s the raw binary representation of the frames captured by the camera. Remember where
it is located or move it to a custom bin folder, as it’s the executable that platypush will use to interact with the
camera module.

This post assumes that you have already installed and configured Platypush on your system. If not, head to my post on
[getting started with Platypush](https://blog.platypush.tech/article/Ultimate-self-hosted-automation-with-Platypush),
the [readthedocs page](https://platypush.readthedocs.io/en/latest/), the
[Gitlab page](https://git.platypush.tech/platypush/platypush) or
[the wiki](https://git.platypush.tech/platypush/platypush/-/wikis/home).

Install also the Python dependencies for the HTTP server, the MLX90640 plugin and Tensorflow:

```shell
[sudo] pip install 'platypush[http,tensorflow,mlx90640]'
```

Heading to your computer (we'll be using it for building the model that will be used on the RaspberryPi), install
OpenCV, Tensorflow and Jupyter and my utilities for handling images:

```shell
# For image manipulation
[sudo] pip install opencv

# Install Jupyter notebook to run the training code
[sudo] pip install jupyterlab
# Then follow the instructions at https://jupyter.org/install

# Tensorflow framework for machine learning and utilities
[sudo] pip install tensorflow numpy matplotlib

# Clone my repository with the image and training utilities
# and the Jupyter notebooks that we'll use for training.
git clone https://github.com/BlackLight/imgdetect-utils
```

## Capturing phase

Now that you’ve got all the hardware and software in place, it’s time to start capturing frames with your camera and use
them to train your model. First, configure
the [MLX90640 plugin](https://platypush.readthedocs.io/en/latest/platypush/plugins/camera.ir.mlx90640.html) in your
Platypush configuration file (by default, `~/.config/platypush/config.yaml`):

```yaml
# Enable the webserver
backend.http:
  enabled: True

camera.ir.mlx90640:
    fps: 16      # Frames per second
    rotate: 270  # Can be 0, 90, 180, 270
    rawrgb_path: /path/to/your/rawrgb
```

Restart the service, and if you haven't already create a user from the web interface at `http://your-rpi:8008`. You
should now be able to take pictures through the API:

```yaml
curl -XPOST -H 'Content-Type: application/json' -d '
{
  "type":"request",
  "action":"camera.ir.mlx90640.capture",
  "args": {
    "output_file":"~/snap.png",
    "scale_factor":20
  }
}' -a 'username:password' http://localhost:8008/execute
```

If everything went well, the thermal picture should be stored under `~/snap.png`. In my case it looks like this while
I’m in standing front of the sensor:

![Thermal camera snapshot](../img/people-detect-1.png)

Notice the glow at the bottom-right corner — that’s actually the heat from my RaspberryPi 4 CPU. It’s there in all the
images I take, and you may probably see similar results if you mounted your camera on top of the Raspberry itself, but
it shouldn’t be an issue for your model training purposes.

If you open the web panel (`http://your-host:8008`) you’ll also notice a new tab, represented by the sun icon, that you
can use to monitor your camera from a web interface.

![Thermal camera web panel screenshot](../img/people-detect-2.png)

You can also monitor the camera directly outside of the webpanel by pointing your browser to
`http://your-host:8008/camera/ir/mlx90640/stream?rotate=270&scale_factor=20`.

Now add a cronjob to your `config.yaml` to take snapshots every minute:

```yaml
cron.ThermalCameraSnapshotCron:
    cron_expression: '* * * * *'
    actions:
        - action: camera.ir.mlx90640.capture
          args:
              output_file: "${__import__(’datetime’).datetime.now().strftime(’/your/img/folder/%Y-%m-%d_%H-%M-%S.jpg’)}"
              grayscale: true
```

Or directly as a Python script under e.g. `~/.config/platypush/thermal.py` (make sure that `~/.config/platypush/__init__.py` also exists so the folder is recognized as a Python module):

```python
from datetime import datetime

from platypush.config import Config
from platypush.cron import cron
from platypush.utils import run


@cron('* * * * *')
def take_thermal_picture(**context):
    run('camera.ir.mlx90640.capture', grayscale=True,
        output_file=datetime.now().strftime('/your/img/folder/%Y-%m-%d_%H-%m-%S.jpg'))
```

The images will be stored under `/your/img/folder` in the format
`YYYY-mm-dd_HH-MM-SS.jpg`. No scale factor is applied — even if the images will
be tiny we’ll only need them to train our model. Also, we’ll convert the images
to grayscale — the neural network will be lighter and actually more accurate,
as it will only have to rely on one variable per pixel without being tricked by
RGB combinations.

Restart Platypush and verify that every minute a new picture is created under
your images directory. Let it run for a few hours or days until you’re happy
with the number of samples. Try to balance the numbers of pictures with no
people in the room and those with people in the room, trying to cover as many
cases as possible — e.g. sitting, standing in different points of the room etc.
As I mentioned earlier, in my case I only needed less than 1000 pictures with
enough variety to achieve accuracy levels above 99%.

## Labelling phase

Once you’re happy with the number of samples you’ve taken, copy the images over
to the machine you’ll be using to train your model (they should be all small
JPEG files weighing under 500 bytes each). Copy them to the folder where you
have cloned my `imgdetect-utils` repository:

```shell
BASEDIR=~/git_tree/imgdetect-utils

# This directory will contain your raw images
IMGDIR=$BASEDIR/datasets/ir/images

# This directory will contain the raw numpy training
# data parsed from the images
DATADIR=$BASEDIR/datasets/ir/data

mkdir -p $IMGDIR
mkdir -p $DATADIR

# Copy the images
scp pi@raspberry:/your/img/folder/*.jpg $IMGDIR

# Create the labels for the images. Each label is a
# directory under $IMGDIR
mkdir $IMGDIR/negative
mkdir $IMGDIR/positive
```

Once the images have been copied and the directories for the labels created,
run the `label.py` script provided in the repository to interactively label the
images:

```shell
cd $BASEDIR
python utils/label.py -d $IMGDIR --scale-factor 10
```

Each image will open in a new window and you can label it by typing either 1
(negative) or 2 (positive) - the label names are gathered from the names of the
directories you created at the previous step:

![Thermal camera pictures labelling](../img/people-detect-3.png)

At the end of the procedure the `negative` and `positive` directories under the
images directory should have been populated.

## Training phase

Once we’ve got all the labelled images it’s time to train our model. A
[`train.ipynb`](https://github.com/BlackLight/imgdetect-utils/blob/master/notebooks/ir/train.ipynb)
Jupyter notebook is provided under `notebooks/ir` and it should be
relatively self-explanatory:

```python
### Import stuff

import os
import sys

import numpy as np

import tensorflow as tf
from tensorflow import keras

######
# Change this with the directory where you cloned the imgdetect-utils repo
basedir = os.path.join(os.path.expanduser('~'), 'git_tree', 'imgdetect-utils')
sys.path.append(os.path.join(basedir))

from src.image_helpers import plot_images_grid, create_dataset_files
from src.train_helpers import load_data, plot_results, export_model

# Define the dataset directory - replace it with the path on your local
# machine where you have stored the previously labelled dataset.
dataset_dir = os.path.join(basedir, 'datasets', 'ir')

# Define the size of the input images. In the case of an
# MLX90640 it will be (24, 32) for horizontal images and
# (32, 24) for vertical images
image_size = (32, 24)

# Image generator batch size
batch_size = 64

# Number of training epochs
epochs = 5
######

# The Tensorflow model and properties file will be stored here
tf_model_dir = os.path.join(basedir, 'models', 'ir', 'tensorflow')
tf_model_file = os.path.join(tf_model_dir, 'ir.pb')
tf_properties_file = os.path.join(tf_model_dir, 'ir.json')

# Base directory that contains your training images and dataset files
dataset_base_dir = os.path.join(basedir, 'datasets', 'ir')
dataset_dir = os.path.join(dataset_base_dir, 'data')

# Store your thermal camera images here
img_dir = os.path.join(dataset_base_dir, 'images')

### Create model directories

os.makedirs(tf_model_dir, mode=0o775, exist_ok=True)

### Create a dataset files from the available images

dataset_files = create_dataset_files(img_dir, dataset_dir,
                                     split_size=1000,
                                     num_threads=1,
                                     resize=input_size)

### Or load existing .npz dataset files



dataset_files = [os.path.join(dataset_dir, f)
                 for f in os.listdir(dataset_dir)
                 if os.path.isfile(os.path.join(dataset_dir, f))
                 and f.endswith('.npz')]

### Get the training and test set randomly out of the dataset with a split of 70/30

train_set, test_set, classes = load_data(*dataset_files, split_percentage=0.7)
print('Loaded {} training images and {} test images. Classes: {}'.format(
    train_set.shape[0], test_set.shape[0], classes))

# Example output:
# Loaded 623 training images and 267 test images. Classes: ['negative' 'positive']

# Extract training set and test set images and labels
train_images = np.asarray([item[0] for item in train_set])
train_labels = np.asarray([item[1] for item in train_set])
test_images = np.asarray([item[0] for item in test_set])
test_labels = np.asarray([item[1] for item in test_set])

### Inspect the first 25 images in the training set 

plot_images_grid(images=train_images, labels=train_labels,
                 classes=classes, rows=5, cols=5)

### Declare the model

# - Flatten input
# - Layer 1: 50% the number of pixels per image (RELU activation)
# - Layer 2: 20% the number of pixels per image (RELU activation)
# - Layer 3: as many neurons as the output labels
#   (in this case 2: negative, positive) (Softmax activation)

model = keras.Sequential([
    keras.layers.Flatten(input_shape=train_images[0].shape),
    keras.layers.Dense(int(0.5 * train_images.shape[1] * train_images.shape[2]),
                       activation=tf.nn.relu),
    keras.layers.Dense(int(0.2 * train_images.shape[1] * train_images.shape[2]),
                       activation=tf.nn.relu),
    keras.layers.Dense(len(classes), activation=tf.nn.softmax)
])

### Compile the model

# - Loss function:This measures how accurate the model is during training. We
#   want to minimize this function to "steer" the model in the right direction.
# - Optimizer: This is how the model is updated based on the data it sees and
#   its loss function.
# - Metrics: Used to monitor the training and testing steps. The following
#   example uses accuracy, the fraction of the images that are correctly classified.

model.compile(optimizer='adam',
              loss='sparse_categorical_crossentropy',
              metrics=['accuracy'])

### Train the model

model.fit(train_images, train_labels, epochs=3)

# Example output:
# Epoch 1/3 623/623 [======] - 0s 487us/sample - loss: 0.2672 - acc: 0.8860
# Epoch 2/3 623/623 [======] - 0s 362us/sample - loss: 0.0247 - acc: 0.9936
# Epoch 3/3 623/623 [======] - 0s 373us/sample - loss: 0.0083 - acc: 0.9984

### Evaluate accuracy against the test set

test_loss, test_acc = model.evaluate(test_images, test_labels)
print('Test accuracy:', test_acc)

# Example output:
# 267/267 [======] - 0s 243us/sample - loss: 0.0096 - acc: 0.9963
# Test accuracy: 0.9962547

### Make predictions on the test set

predictions = model.predict(test_images)

# Plot a grid of 36 images and show expected vs. predicted values
plot_results(images=test_images, labels=test_labels,
             classes=classes, predictions=predictions,
             rows=9, cols=4)

### Export as a Tensorflow model

export_model(model, tf_model_file,
             properties_file=tf_properties_file,
             classes=classes,
             input_size=input_size)
```

If you managed to execute the whole notebook correctly you’ll have a file named
`ir.pb` under `models/ir/tensorflow`. That’s your Tensorflow model file, you can
now copy it over to the RaspberryPi and use it to do predictions:

```shell
scp $BASEDIR/models/ir/tensorflow/ir.pb pi@raspberry:/home/pi/models
```

## Detect people in the room

Once the Tensorflow model has been deployed to the RaspberryPi you can replace the
previous cronjob that stores pictures at regular intervals with a cronjob that captures
pictures and feeds them to the previously trained model